Transcription Factor Browser

Detailed Locus Information for CNAG_04583T0
Species Cryptococcus neoformans var. grubii H99
Gene Annotation hypothetical protein
Gene Name DDT1
TF Family Name DDT (Classification based on Fungal Transcription Factor DB)
KEGG Linkout  KEGG::CNJ00250    
Genome Browser JBrowse link goes here. Sequence information also available from JBrowse.
Functional Annotation
KEGG Annotation
KO AccessionE-valueScore
K11655 6.7e-122406.6
Pfam Annotation
Pfam AccessionE-valueScore
PF02791 1.2e-1761.7
PF10537 1.1e-34116.3
PF15613 9.9e-2067.3
Expression Data

Notation Condition Normalized Raw Expression
AYPD 30°C, concentration: 2x 10^8 cells/ml 6,596
BYPD 30°C, concentration: 5x10^7 cells/ml 5,870
CYPD 30°C, fluconazole treatment, concentration: 5x10^7 cells/ml 5,710
DYPD 30°C, SDS 0.01% treatment, concentration: 5x10^7 cells/ml 6,453
EYPD 37°C, concentration: 5x10^7 cells/ml 7,288
FYP+galactose 30°C, concentration: 2x10^8 cells/ml 7,501
Gene Disruption Strategy
Primer NamePrimer DescriptionSequence
L15' flanking region primer 1GCTCGCTACATTTTCAGGTATC
L25' flanking region primer 2TCACTGGCCGTCGTTTTACGAGAGGGTCGGAAATAGAAG
POSouthern blot probe primerGGGGACTGTTTTGATGACC
R13' flanking region primer 1CATGGTCATAGCTGTTTCCTGGGGAAGGAGTAATGCCTGAC
R23' flanking region primer 2AACCGTGATGGAGATTGG
SOdiagnostic screening primer, pairing with B79CGGTGTGCGATTCTAACTTC
Phenotype Assays
Growth
Mating Data
Virulence Factor Production
Capsule Urease
Melanin
Stress Response and Adaptation
Osmotic Stress
Oxidative Stress Heavy Metal Stress
Cell Wall Stress
Antifungal Drug Susceptibility
Virulence Data by the Insect Host Model (Galleria mellonella)
Lung Infectivity Data by the Signature-tag Mutagenesis-based Murine Host Model