Transcription Factor Browser

Detailed Locus Information for CNAG_03710T0
Species Cryptococcus neoformans var. grubii H99
Gene Annotation hypothetical protein
Gene Name ECM22
TF Family Name Zn2Cys6 (Classification based on Fungal Transcription Factor DB)
KEGG Linkout  KEGG::CNB02070    
Genome Browser JBrowse link goes here. Sequence information also available from JBrowse.
Functional Annotation
KEGG Annotation
KO AccessionE-valueScore
K09245 1.1e-38131.5
Pfam Annotation
Pfam AccessionE-valueScore
PF11951 1.5e-47160.3
Expression Data

Notation Condition Normalized Raw Expression
AYPD 30°C, concentration: 2x 10^8 cells/ml 4,663
BYPD 30°C, concentration: 5x10^7 cells/ml 3,657
CYPD 30°C, fluconazole treatment, concentration: 5x10^7 cells/ml 3,859
DYPD 30°C, SDS 0.01% treatment, concentration: 5x10^7 cells/ml 3,724
EYPD 37°C, concentration: 5x10^7 cells/ml 3,577
FYP+galactose 30°C, concentration: 2x10^8 cells/ml 4,228
Gene Disruption Strategy
Primer NamePrimer DescriptionSequence
L15' flanking region primer 1AAGACAAGAAGCAGCAGCG
L25' flanking region primer 2GCTCACTGGCCGTCGTTTTACTATCATTCCCATCCGTCGC
POSouthern blot probe primerTCCTCTGCACCAAGACTGTG
R13' flanking region primer 1CATGGTCATAGCTGTTTCCTGCGCTCAATAACATCGTCAGAC
R23' flanking region primer 2CCAGCCTTCATCTCTCTTCC
SOdiagnostic screening primer, pairing with B79CAGAACTGATAACTGGCTGC
Phenotype Assays
Growth
Mating Data
Virulence Factor Production
Capsule Urease
Melanin
Stress Response and Adaptation
Osmotic Stress
Oxidative Stress Heavy Metal Stress
Cell Wall Stress
Antifungal Drug Susceptibility
Virulence Data by the Insect Host Model (Galleria mellonella)
Lung Infectivity Data by the Signature-tag Mutagenesis-based Murine Host Model